STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115581324Protein mono-ADP-ribosyltransferase PARP14-like. (1853 aa)    
Predicted Functional Partners:
ENSSAUP00010059262
annotation not available
 
 
 
 0.953
LOC115585539
Probable E3 ubiquitin-protein ligase DTX3.
 
 
 
 0.925
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.864
ENSSAUP00010022184
annotation not available
  
 
 0.832
ENSSAUP00010032141
annotation not available
  
 
0.646
LOC115595093
Ubl carboxyl-terminal hydrolase 18-like.
   
 
 0.639
ENSSAUP00010012265
Poly (ADP-ribose) polymerase family, member 3.
    
 
 0.638
fam162a
Family with sequence similarity 162 member A.
   
 
 0.614
parp4
poly(ADP-ribose) polymerase family member 4.
    
 
 0.598
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.597
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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