STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115580782Transcription factor E2F4-like. (352 aa)    
Predicted Functional Partners:
tfdp1
Transcription factor Dp-1.
   
 0.967
LOC115586267
Retinoblastoma-like protein 2.
   
 0.955
rb1
RB transcriptional corepressor 1.
   
 0.955
rbl1
RB transcriptional corepressor like 1.
   
 0.950
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.869
ENSSAUP00010014730
annotation not available
    
 0.848
LOC115592497
Mothers against decapentaplegic homolog 4-like.
    
 0.848
LOC115578329
Mothers against decapentaplegic homolog 4-like.
    
 0.840
LOC115573237
Transcription factor E2F5-like.
  
  
 
0.815
e2f4
E2F transcription factor 4.
  
  
 
0.809
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.