STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prelpProline and arginine rich end leucine rich repeat protein. (379 aa)    
Predicted Functional Partners:
ntng1
Netrin G1.
    
 0.762
LOC115573376
netrin-G1-like.
    
 0.762
bgn
Biglycan.
  
 
0.744
lum
Lumican.
  
 
0.733
ogn
Osteoglycin.
 
 
 
0.732
LOC115585355
Mimecan-like.
 
 
 
0.718
LOC115572234
Adhesion G protein-coupled receptor L2-like.
    
 
 0.717
LOC115575230
Adhesion G protein-coupled receptor L1-like.
    
 
 0.717
adgrl2
Adhesion G protein-coupled receptor L2.
    
 
 0.717
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.716
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.