STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115576396UNC93-like protein MFSD11. (446 aa)    
Predicted Functional Partners:
ENSSAUP00010047275
Short chain dehydrogenase/reductase family 42E, member 1.
   
 
  0.574
mat2b
Methionine adenosyltransferase 2B.
   
 
  0.572
hsd3b1
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1.
   
 
  0.572
nsdhl
NAD(P) dependent steroid dehydrogenase-like.
   
 
  0.572
hsd3b7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7.
   
 
  0.572
got2
Glutamic-oxaloacetic transaminase 2.
   
 
  0.495
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.487
LOC115579804
40S ribosomal protein S17-like.
   
 
  0.480
LOC115582435
Flavin reductase (NADPH)-like.
   
 
  0.480
LOC115574917
GDP-L-fucose synthase-like.
   
 
  0.480
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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