STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115597042Solute carrier family 35 member F2-like. (404 aa)    
Predicted Functional Partners:
dhdds
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.796
ggps1
Geranylgeranyl diphosphate synthase 1.
    
  0.779
pdss1
Decaprenyl diphosphate synthase subunit 1.
    
  0.646
pdss2
Decaprenyl diphosphate synthase subunit 2.
    
  0.646
xpnpep2
X-prolyl aminopeptidase 2.
  
 
 0.563
xpnpep1
X-prolyl aminopeptidase 1.
  
 
 0.563
LOC115570324
FAST kinase domain-containing protein 3, mitochondrial-like.
    
 0.551
LOC115588623
FAST kinase domain-containing protein 3, mitochondrial-like.
    
 0.551
xpnpep3
X-prolyl aminopeptidase 3.
    
 0.551
pepd
Peptidase D.
    
 0.551
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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