STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115569121Alpha-2-macroglobulin-like. (1481 aa)    
Predicted Functional Partners:
LOC115589961
Complement factor I-like.
   
 0.787
RING1
E3 ubiquitin-protein ligase RING2-A-like.
    
 0.786
ENSSAUP00010055617
Ring finger protein 2.
    
 0.786
LOC115571487
Chromobox protein homolog 2-like.
    
 0.785
ENSSAUP00010002873
annotation not available
    
 0.775
ENSSAUP00010036365
Bmi1 polycomb ring finger oncogene 1a.
    
 0.775
ENSSAUP00010068922
annotation not available
    
 0.773
cbx8
Chromobox 8.
    
 0.770
LOC115575370
Chromobox protein homolog 8-like.
    
 0.770
c9
Complement C9.
   
 0.753
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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