STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnk2Tyrosine kinase non receptor 2. (1207 aa)    
Predicted Functional Partners:
LOC115583086
Cell division control protein 42 homolog.
    
 
 0.773
CDC42
Cell division control protein 42 homolog.
    
 
 0.773
LOC115576166
Growth factor receptor-bound protein 2.
    
 
 0.752
ENSSAUP00010023061
annotation not available
    
 
 0.752
LOC115578553
Cell division control protein 42 homolog.
    
 
 0.719
LOC115568016
Cell division control protein 42 homolog.
    
 
 0.719
nck1
NCK adaptor protein 1.
    
 
 0.639
nck2
NCK adaptor protein 2.
    
 
 0.639
sh3rf3
SH3 domain containing ring finger 3.
    
 
 0.622
ENSSAUP00010017669
GRB2 related adaptor protein b.
    
 
 0.529
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.