Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSAUP00010025514 | LOC115572870 | ENSSAUP00010025514 | ENSSAUP00010014918 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | Regulator of nonsense transcripts 1-like. | 0.992 |
ENSSAUP00010025514 | LOC115576300 | ENSSAUP00010025514 | ENSSAUP00010044697 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | RNA-binding protein with serine-rich domain 1-like. | 0.566 |
ENSSAUP00010025514 | UPF2 | ENSSAUP00010025514 | ENSSAUP00010059571 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | UPF2 regulator of nonsense mediated mRNA decay. | 0.982 |
ENSSAUP00010025514 | casc3 | ENSSAUP00010025514 | ENSSAUP00010037648 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | CASC3 exon junction complex subunit. | 0.485 |
ENSSAUP00010025514 | rbm8a | ENSSAUP00010025514 | ENSSAUP00010033388 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | RNA binding motif protein 8A. | 0.969 |
ENSSAUP00010025514 | smg5 | ENSSAUP00010025514 | ENSSAUP00010036326 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | SMG5 nonsense mediated mRNA decay factor. | 0.914 |
ENSSAUP00010025514 | smg6 | ENSSAUP00010025514 | ENSSAUP00010007120 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | SMG6 nonsense mediated mRNA decay factor. | 0.914 |
ENSSAUP00010025514 | smg7 | ENSSAUP00010025514 | ENSSAUP00010007527 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | SMG7 nonsense mediated mRNA decay factor. | 0.992 |
ENSSAUP00010025514 | upf3a | ENSSAUP00010025514 | ENSSAUP00010008260 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | UPF3A regulator of nonsense mediated mRNA decay. | 0.689 |
ENSSAUP00010025514 | upf3b | ENSSAUP00010025514 | ENSSAUP00010043415 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | UPF3B regulator of nonsense mediated mRNA decay. | 0.691 |
LOC115572870 | ENSSAUP00010025514 | ENSSAUP00010014918 | ENSSAUP00010025514 | Regulator of nonsense transcripts 1-like. | SMG1 nonsense mediated mRNA decay associated PI3K related kinase. | 0.992 |
LOC115572870 | LOC115576300 | ENSSAUP00010014918 | ENSSAUP00010044697 | Regulator of nonsense transcripts 1-like. | RNA-binding protein with serine-rich domain 1-like. | 0.978 |
LOC115572870 | UPF2 | ENSSAUP00010014918 | ENSSAUP00010059571 | Regulator of nonsense transcripts 1-like. | UPF2 regulator of nonsense mediated mRNA decay. | 0.992 |
LOC115572870 | casc3 | ENSSAUP00010014918 | ENSSAUP00010037648 | Regulator of nonsense transcripts 1-like. | CASC3 exon junction complex subunit. | 0.974 |
LOC115572870 | rbm8a | ENSSAUP00010014918 | ENSSAUP00010033388 | Regulator of nonsense transcripts 1-like. | RNA binding motif protein 8A. | 0.974 |
LOC115572870 | smg5 | ENSSAUP00010014918 | ENSSAUP00010036326 | Regulator of nonsense transcripts 1-like. | SMG5 nonsense mediated mRNA decay factor. | 0.947 |
LOC115572870 | smg6 | ENSSAUP00010014918 | ENSSAUP00010007120 | Regulator of nonsense transcripts 1-like. | SMG6 nonsense mediated mRNA decay factor. | 0.943 |
LOC115572870 | smg7 | ENSSAUP00010014918 | ENSSAUP00010007527 | Regulator of nonsense transcripts 1-like. | SMG7 nonsense mediated mRNA decay factor. | 0.947 |
LOC115572870 | upf3a | ENSSAUP00010014918 | ENSSAUP00010008260 | Regulator of nonsense transcripts 1-like. | UPF3A regulator of nonsense mediated mRNA decay. | 0.981 |
LOC115572870 | upf3b | ENSSAUP00010014918 | ENSSAUP00010043415 | Regulator of nonsense transcripts 1-like. | UPF3B regulator of nonsense mediated mRNA decay. | 0.983 |
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