STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010014925annotation not available (392 aa)    
Predicted Functional Partners:
LOC115581257
Homer protein homolog 1-like.
    
0.953
grm1
Glutamate metabotropic receptor 1.
    
 0.882
HOMER1
Homer scaffold protein 1.
    
 
0.817
homer2
Homer scaffold protein 2.
  
 
 
0.817
grm5
Glutamate metabotropic receptor 5.
    
 0.792
ENSSAUP00010030584
Glutamate receptor, metabotropic 5a.
    
 0.792
LOC115565993
Metabotropic glutamate receptor 1-like.
    
 0.792
ENSSAUP00010034176
annotation not available
    
 0.654
shank2
SH3 and multiple ankyrin repeat domains 2.
    
 0.654
shank3
SH3 and multiple ankyrin repeat domains 3.
    
 0.654
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.