STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm8bTranslocase of inner mitochondrial membrane 8 homolog B. (147 aa)    
Predicted Functional Partners:
timm13
Translocase of inner mitochondrial membrane 13.
   
 0.992
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.990
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.905
timm23
Translocase of inner mitochondrial membrane 23.
   
 0.855
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
   
  
 0.821
timm10b
Translocase of inner mitochondrial membrane 10B.
   
 0.811
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
  
 0.797
mrps21
Mitochondrial ribosomal protein S21.
   
    0.786
tomm7
Translocase of outer mitochondrial membrane 7.
   
  
 0.785
txndc17
Thioredoxin domain containing 17.
   
    0.770
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.