STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmed2Transmembrane p24 trafficking protein 2. (207 aa)    
Predicted Functional Partners:
LOC115597606
Transmembrane emp24 domain-containing protein 10-like.
   
0.996
ENSSAUP00010019809
Transmembrane p24 trafficking protein 10.
   
0.996
ENSSAUP00010005329
Transmembrane p24 trafficking protein 4.
   
0.985
tmed9
Transmembrane p24 trafficking protein 9.
   
0.985
LOC115569345
Transmembrane emp24 domain-containing protein 9-like.
   
 0.985
LOC115568502
Transmembrane emp24 domain-containing protein 11-like.
   
0.980
ENSSAUP00010014716
Transmembrane p24 trafficking protein 7.
   
0.965
LOC115579867
Transmembrane emp24 domain-containing protein 3-like.
   
0.965
LOC115572053
TIR domain-containing adapter molecule 1-like.
   
 0.965
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.919
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.