STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigxPhosphatidylinositol glycan anchor biosynthesis class X. (247 aa)    
Predicted Functional Partners:
pigm
Phosphatidylinositol glycan anchor biosynthesis class M.
     
 0.925
ENSSAUP00010034201
Phosphatidylinositol glycan anchor biosynthesis, class V.
    
 0.898
pigw
Phosphatidylinositol glycan anchor biosynthesis class W.
    
 0.884
pigb
Phosphatidylinositol glycan anchor biosynthesis class B.
     
 0.884
yars1
tyrosyl-tRNA synthetase 1.
  
 
 0.876
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
     
 0.871
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.865
dpm3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.852
ENSSAUP00010041398
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
  
 
  0.851
mtif2
Mitochondrial translational initiation factor 2.
  
 0.841
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.