STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010016304annotation not available (350 aa)    
Predicted Functional Partners:
LOC115567497
Casein kinase II subunit beta.
   
 0.950
LOC115579050
Casein kinase II subunit beta.
   
 0.950
ssrp1
Structure specific recognition protein 1.
    
 0.908
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.902
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.883
nol6
Nucleolar protein 6.
    
 0.869
dvl1
Dishevelled segment polarity protein 1.
    
 0.867
dvl3
Dishevelled segment polarity protein 3.
    
 0.867
ENSSAUP00010029879
Tumor protein p53.
    
 0.828
ctnnb1
Catenin beta 1.
     
 0.823
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.