STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115574362Syntaxin-binding protein 6-like. (296 aa)    
Predicted Functional Partners:
prkcz
Protein kinase C zeta.
    
 0.871
ENSSAUP00010068897
Protein kinase C, iota.
    
 0.871
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region like.
    
  0.801
ENSSAUP00010068935
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.699
LOC115586669
Partitioning defective 6 homolog alpha-like.
    
 
 0.665
ENSSAUP00010007627
Par-6 family cell polarity regulator gamma b.
    
 
 0.665
ENSSAUP00010041401
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 
 0.665
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.661
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.661
LOC115581925
Syntaxin-2-like.
    
 0.618
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.