STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115579733Cytochrome b-245 light chain. (185 aa)    
Predicted Functional Partners:
ENSSAUP00010023540
Neutrophil cytosolic factor 1.
   
 0.982
LOC115577026
Cytochrome b-245 heavy chain.
   
 0.962
ncf4
Neutrophil cytosolic factor 4.
   
 0.955
nox4
NADPH oxidase 4.
   
 0.939
xk
X-linked Kx blood group.
   
 0.935
xkrx
XK related X-linked.
   
 0.935
nox1
NADPH oxidase 1.
   
 0.935
ncf2
Neutrophil cytosolic factor 2.
   
 0.921
ENSSAUP00010041775
NADPH oxidase activator 1.
   
 0.921
ENSSAUP00010066685
Matrix metallopeptidase 9.
     
 0.900
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.