STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010018394annotation not available (497 aa)    
Predicted Functional Partners:
znrd1
Zinc ribbon domain containing 1.
    
 0.791
ENSSAUP00010000488
TWIST neighbor.
    
 0.771
ENSSAUP00010012452
RNA polymerase I subunit E.
    
 0.769
polr1c
RNA polymerase I and III subunit C.
    
  0.769
cd3eap
CD3e molecule associated protein.
    
  0.762
ENSSAUP00010027939
annotation not available
    
 0.741
ENSSAUP00010038877
RNA polymerase I subunit A.
    
 0.740
cavin1
Caveolae associated protein 1.
    
 0.721
polr2c
RNA polymerase II subunit C.
    
  0.719
ubtf
Upstream binding transcription factor.
    
 0.696
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.