STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115591784Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like. (136 aa)    
Predicted Functional Partners:
gnb5
G protein subunit beta 5.
    
 0.887
LOC115580622
Guanine nucleotide-binding protein subunit beta-5b-like.
    
 0.887
HTR1F
5-hydroxytryptamine receptor 1F.
    
 0.874
htr5a
5-hydroxytryptamine receptor 5A.
    
 0.852
LOC115581150
5-hydroxytryptamine receptor 1A-alpha.
    
 0.845
ptger3
Prostaglandin E receptor 3.
    
 0.844
GNG3
G protein subunit gamma 3.
  
 
0.840
LOC115577290
Prostaglandin E2 receptor EP2 subtype-like.
    
  0.839
ENSSAUP00010015711
Apelin receptor a.
    
  0.839
LOC115566012
B1 bradykinin receptor-like.
    
  0.839
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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