STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc37a4Solute carrier family 37 member 4. (429 aa)    
Predicted Functional Partners:
LOC115567700
Cytochrome b5 reductase 4.
    
  0.800
LOC115578017
Bifunctional epoxide hydrolase 2-like.
    
 0.644
LOC115577027
Bifunctional epoxide hydrolase 2-like.
    
 0.644
suox
Sulfite oxidase.
     
 0.629
LOC115568837
Malate synthase, glyoxysomal-like.
   
 
 0.610
tk1
Thymidine kinase 1.
    
 0.608
LOC115567360
Glyceraldehyde-3-phosphate dehydrogenase 2.
   
 0.606
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.606
LOC115578522
Glyceraldehyde-3-phosphate dehydrogenase-like.
   
 0.606
ENSSAUP00010045170
annotation not available
   
 0.606
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.