STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb39Zinc finger and BTB domain containing 39. (856 aa)    
Predicted Functional Partners:
ENSSAUP00010046194
annotation not available
    
  0.844
ENSSAUP00010046198
annotation not available
    
  0.588
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
    
 0.578
bard1
BRCA1 associated RING domain 1.
    
  0.577
crbn
Cereblon.
    
 
 0.577
rnf166
Ring finger protein 166.
    
 0.570
csrnp2
Cysteine and serine rich nuclear protein 2.
   
  
 0.551
YTHDC2
YTH domain containing 2.
    
  0.548
LOC115567700
Cytochrome b5 reductase 4.
    
  0.511
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.507
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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