STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010020408Centrosomal protein 192. (1737 aa)    
Predicted Functional Partners:
plk4
Polo like kinase 4.
    
 0.982
nup107
Nucleoporin 107.
   
 0.879
nup98
Nucleoporin 98.
    
 0.862
depdc5
DEP domain containing 5, GATOR1 subcomplex subunit.
   
 
 0.856
ENSSAUP00010005082
Missing oocyte, meiosis regulator, homolog (Drosophila).
   
  0.851
wdr59
WD repeat domain 59.
    
  0.846
wdr24
WD repeat domain 24.
    
  0.846
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
     
 0.840
haus6
HAUS augmin like complex subunit 6.
   
 
 0.831
arid4a
AT-rich interaction domain 4A.
    
 0.827
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.