STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spred1Sprouty related EVH1 domain containing 1. (457 aa)    
Predicted Functional Partners:
ENSSAUP00010027735
Neurofibromin 1b.
    
 0.931
nek2
NIMA related kinase 2.
    
 0.814
abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase.
    
 0.772
abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
    
 0.772
kras
KRAS proto-oncogene, GTPase.
   
 0.713
LOC115575058
GTPase HRas-like.
   
 0.713
hras
HRas proto-oncogene, GTPase.
   
 0.713
CSDE1
Cold shock domain containing E1.
   
 0.713
LOC115572473
Profilin-2-like.
   
 0.682
LOC115578193
Uncharacterized LOC115578193.
   
 0.682
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.