STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010021013Nuclear receptor coactivator 1. (1522 aa)    
Predicted Functional Partners:
nr1h3
Nuclear receptor subfamily 1 group H member 3.
    
 0.918
pgr
Progesterone receptor.
    
 0.895
rxra
Retinoid X receptor alpha.
   
 0.888
LOC115584674
Bile acid receptor-like.
    
 0.882
nr1h4
Nuclear receptor subfamily 1 group H member 4.
    
 0.882
LOC115585272
Vitamin D3 receptor A.
    
 0.868
LOC115583480
Vitamin D3 receptor B.
    
 0.868
LOC115567545
Retinoic acid receptor RXR-beta-A-like.
   
 0.865
LOC115591884
Retinoic acid receptor RXR-gamma-B.
   
 0.865
RXRB
Retinoic acid receptor RXR-beta-A.
   
 0.865
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.