STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plpp1Phospholipid phosphatase 1. (282 aa)    
Predicted Functional Partners:
sgpl1
Sphingosine-1-phosphate lyase 1.
    
 0.865
kdsr
3-ketodihydrosphingosine reductase.
    
 0.854
LOC115583748
Phosphatidate phosphatase LPIN2-like.
    
 0.849
cers5
Ceramide synthase 5.
    
 0.848
cers6
Ceramide synthase 6.
    
 0.848
CERS5
Ceramide synthase 5-like.
    
 0.848
cers1
Ceramide synthase 1.
    
 0.847
ENSSAUP00010067541
Ceramide synthase 4a.
    
 0.847
LOC115578617
Ceramide synthase 2-like.
    
 0.846
LOC115572965
Ceramide synthase 2-like.
    
 0.842
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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