STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkab1Protein kinase AMP-activated non-catalytic subunit beta 1. (268 aa)    
Predicted Functional Partners:
ENSSAUP00010018613
Protein kinase, AMP-activated, alpha 2 catalytic subunit.
    
 0.988
prkaa1
Protein kinase AMP-activated catalytic subunit alpha 1.
    
 0.986
prkag1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.983
ENSSAUP00010038516
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.982
LOC115572873
5'-AMP-activated protein kinase subunit gamma-2-like.
   
 0.980
LOC115588791
5'-AMP-activated protein kinase subunit gamma-1-like.
   
 0.977
stk11
Serine/threonine kinase 11.
    
 0.954
ENSSAUP00010059947
annotation not available
   
 0.952
LOC115592583
Calcium/calmodulin-dependent protein kinase kinase 2-like.
    
 0.927
LOC115581310
5'-AMP-activated protein kinase subunit beta-1-like.
  
  
0.904
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.