STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigoPhosphatidylinositol glycan anchor biosynthesis class O. (1091 aa)    
Predicted Functional Partners:
ENSSAUP00010005863
Phosphatidylinositol glycan anchor biosynthesis, class K.
    
 0.951
pigf
Phosphatidylinositol glycan anchor biosynthesis class F.
    
 0.948
pigu
Phosphatidylinositol glycan anchor biosynthesis class U.
   
 0.941
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.940
pigs
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 0.939
pigt
Phosphatidylinositol glycan anchor biosynthesis class T.
    
 0.938
pigb
Phosphatidylinositol glycan anchor biosynthesis class B.
    
 0.935
LOC115582391
N-acetylmuramoyl-L-alanine amidase-like.
   
 0.906
kdsr
3-ketodihydrosphingosine reductase.
     
 0.870
coasy
Coenzyme A synthase.
    
 0.868
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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