STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tiam1TIAM Rac1 associated GEF 1. (1589 aa)    
Predicted Functional Partners:
pard3
Par-3 family cell polarity regulator.
    
 0.868
PARD3
Partitioning defective 3 homolog.
    
 0.868
ENSSAUP00010056173
annotation not available
    
 0.855
mras
Muscle RAS oncogene homolog.
    
 0.835
LOC115581235
Rho-related BTB domain-containing protein 2-like.
    
 0.809
ENSSAUP00010014475
annotation not available
     
 0.803
LOC115572444
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
     
 0.802
LOC115583086
Cell division control protein 42 homolog.
    
 0.785
CDC42
Cell division control protein 42 homolog.
    
 0.785
LOC115575004
Ras-related C3 botulinum toxin substrate 3-like.
    
 0.783
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.