STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nup93Nucleoporin 93. (820 aa)    
Predicted Functional Partners:
nup205
Nucleoporin 205.
   
 0.999
nup98
Nucleoporin 98.
   
 0.999
LOC115588252
ranBP2-like and GRIP domain-containing protein 3.
   
 0.999
nup85
Nucleoporin 85.
   
 0.999
nup155
Nucleoporin 155.
   
 0.999
nup35
Nucleoporin 35.
   
 0.998
NUP54
Nucleoporin 54.
   
 0.998
nup188
Nucleoporin 188.
   
 0.998
LOC115567159
Nucleoporin SEH1.
   
 0.997
nup107
Nucleoporin 107.
   
 0.997
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.