STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010021794Si:ch211-66e2.5. (304 aa)    
Predicted Functional Partners:
ENSSAUP00010002475
annotation not available
    
 0.800
ENSSAUP00010002519
annotation not available
    
 0.800
LOC115570910
Integrin alpha-M-like.
    
 0.800
itga4
Integrin subunit alpha 4.
    
  0.680
itga9
Integrin subunit alpha 9.
    
  0.680
LOC115572800
Integrin beta-1-like.
    
 0.569
itgb1
Integrin subunit beta 1.
    
 0.569
LOC115588079
Integrin beta-2-like.
    
 0.564
mst1r
Macrophage stimulating 1 receptor.
  
 
  0.564
itgbl1
Integrin subunit beta like 1.
    
 0.535
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.