STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftcdnl1Formiminotransferase cyclodeaminase N-terminal like. (329 aa)    
Predicted Functional Partners:
ENSSAUP00010053745
Phosphoribosylglycinamide formyltransferase.
    
 0.960
ENSSAUP00010044894
Methylenetetrahydrofolate reductase (NAD(P)H).
    
 0.914
ENSSAUP00010010688
Mitochondrial methionyl-tRNA formyltransferase.
    
 0.879
LOC115582377
Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial-like.
    
 0.868
ENSSAUP00010052982
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
    
 0.868
mthfs
Methenyltetrahydrofolate synthetase.
    
 0.858
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
    
 0.858
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.844
ASS1
Argininosuccinate synthase 1.
  
 
 0.835
ENSSAUP00010006394
annotation not available
    
 0.831
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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