STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115591567Interferon-induced protein 44-like. (468 aa)    
Predicted Functional Partners:
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.898
xaf1
XIAP associated factor 1.
   
  
 0.856
ubxn7
UBX domain protein 7.
    
   0.719
LOC115595093
Ubl carboxyl-terminal hydrolase 18-like.
   
 
 0.657
ENSSAUP00010060948
Epithelial stromal interaction 1.
   
  
 0.651
ENSSAUP00010068298
Mitochondrial ribosomal protein L47.
   
 
 0.645
mrpl22
Mitochondrial ribosomal protein L22.
   
 
 0.644
mrpl33
Mitochondrial ribosomal protein L33.
   
   0.643
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.643
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.641
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.