STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115586487Small ubiquitin-related modifier 2. (98 aa)    
Predicted Functional Partners:
LOC115588252
ranBP2-like and GRIP domain-containing protein 3.
   
 0.987
sae1
SUMO1 activating enzyme subunit 1.
   
 0.956
pcna
Proliferating cell nuclear antigen.
   
 0.954
ube2i
Ubiquitin conjugating enzyme E2 I.
   
 0.954
LOC115575987
SUMO-conjugating enzyme UBC9-like.
   
 0.954
uba2
Ubiquitin like modifier activating enzyme 2.
   
 0.946
pias4
Protein inhibitor of activated STAT 4.
    
 0.942
ENSSAUP00010063934
RAN binding protein 1.
   
 0.934
LOC115584698
Sentrin-specific protease 1-like.
    
 0.917
LOC115597640
Sentrin-specific protease 2-like.
    
 0.917
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.