STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010023021Platelet-activating factor receptor. (382 aa)    
Predicted Functional Partners:
LOC115582449
Guanine nucleotide-binding protein G(q) subunit alpha.
   
 0.721
LOC115581569
Guanine nucleotide-binding protein subunit alpha-14-like.
   
 0.721
LOC115592753
Guanine nucleotide-binding protein subunit alpha-14-like.
    
  0.713
LOC115592058
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.713
LOC115592752
Guanine nucleotide-binding protein G(q) subunit alpha-like.
    
  0.703
LOC115565813
Guanine nucleotide-binding protein G(q) subunit alpha-like.
   
 0.662
LOC115591176
Guanine nucleotide-binding protein G(q) subunit alpha-like.
   
 0.662
grk6
G protein-coupled receptor kinase 6.
   
  0.497
ENSSAUP00010055734
G protein-coupled receptor kinase 3.
   
  0.497
grk4
G protein-coupled receptor kinase 4.
   
  0.497
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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