STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlphMelanophilin. (581 aa)    
Predicted Functional Partners:
LOC115581446
Ras-related protein Rab-27B-like.
    
 
 0.772
ENSSAUP00010027755
RAB27B, member RAS oncogene family.
    
 
 0.772
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.772
ENSSAUP00010018122
Rab interacting lysosomal protein-like 2.
    
 
 0.714
ENSSAUP00010025683
Myosin VC.
    
 
 0.668
ENSSAUP00010026646
Myosin VAb.
    
 
 0.668
LOC115591010
Unconventional myosin-Vb-like.
    
 
 0.668
ENSSAUP00010066686
Myosin VAa.
    
 
 0.668
ENSSAUP00010005468
annotation not available
    
 
 0.484
ENSSAUP00010008124
Ras association and DIL domains.
    
 
 0.484
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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