STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115576831Transmembrane gamma-carboxyglutamic acid protein 2-like. (200 aa)    
Predicted Functional Partners:
ENSSAUP00010023578
Nitric oxide synthase interacting protein.
      
 0.539
laptm4a
Lysosomal protein transmembrane 4 alpha.
      
 0.531
LOC115576870
Reticulocalbin-1-like.
      
 0.516
med25
Mediator complex subunit 25.
      
 0.502
rpl13a
Ribosomal protein L13a.
      
 0.495
LOC115575296
Protein shisa-9B-like.
      
 0.489
lrrc20
Leucine rich repeat containing 20.
      
 0.475
ENSSAUP00010027174
annotation not available
      
 0.422
immp1l
Inner mitochondrial membrane peptidase subunit 1.
      
 0.412
bag3
BCL2 associated athanogene 3.
    
 
 0.405
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.