STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010024705Calreticulin. (414 aa)    
Predicted Functional Partners:
ENSSAUP00010054998
Protein disulfide isomerase family A, member 3.
   
 0.985
ENSSAUP00010050508
Heat shock protein 90, beta (grp94), member 1.
   
 0.977
tapbp
TAP binding protein.
    
 0.969
ENSSAUP00010015196
annotation not available
   
 0.961
ENSSAUP00010019818
Heat shock protein 5.
   
 0.961
pdia6
Protein disulfide isomerase family A member 6.
   
 0.943
pdia4
Protein disulfide isomerase family A member 4.
   
 0.939
ENSSAUP00010012050
Calnexin.
   
0.916
ankrd45
Ankyrin repeat domain 45.
   
 0.916
LOC115580713
Calnexin-like.
   
0.912
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.