STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain containing protein 1. (566 aa)    
Predicted Functional Partners:
LOC115588252
ranBP2-like and GRIP domain-containing protein 3.
   
 0.752
LOC115571389
Cullin-3.
    
 0.673
CUL3
Cullin-3-like.
    
 0.673
zfand4
Zinc finger AN1-type containing 4.
    
 0.657
cul1
Cullin 1.
    
 0.652
adgrd1
Adhesion G protein-coupled receptor D1.
    
 0.639
ENSSAUP00010004581
Adhesion G protein-coupled receptor B2.
    
 0.639
ENSSAUP00010022102
RAN, member RAS oncogene family.
    
 0.639
LOC115568161
Adhesion G protein-coupled receptor B1-like.
    
 0.639
adgrb3
Adhesion G protein-coupled receptor B3.
    
 0.639
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.