STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c8h16orf70Chromosome 8 C16orf70 homolog. (427 aa)    
Predicted Functional Partners:
bcas3
BCAS3 microtubule associated cell migration factor.
   
 
 0.938
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.592
ENSSAUP00010064486
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.592
LOC115584618
Double-strand-break repair protein rad21 homolog.
 
      0.539
ENSSAUP00010029055
DNA primase subunit 1.
 
      0.528
kif17
Kinesin family member 17.
      
 0.518
mrpl48
Mitochondrial ribosomal protein L48.
      
 0.475
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
    
 
 0.467
CASK
Calcium/calmodulin dependent serine protein kinase.
      
 0.420
ENSSAUP00010067569
Calcium/calmodulin-dependent serine protein kinase b.
      
 0.420
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.