STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znrd2Zinc ribbon domain containing 2. (233 aa)    
Predicted Functional Partners:
cct5
Chaperonin containing TCP1 subunit 5.
    
   0.841
cct7
Chaperonin containing TCP1 subunit 7.
    
   0.716
cct2
Chaperonin containing TCP1 subunit 2.
    
   0.573
rapgef2
Rap guanine nucleotide exchange factor 2.
    
 
 0.516
frmd8
FERM domain containing 8.
      
 0.506
LOC115594527
Protein FAM89A-like.
   
  
 0.493
cct4
Chaperonin containing TCP1 subunit 4.
    
   0.455
cct3
Chaperonin containing TCP1 subunit 3.
   
   0.455
ENSSAUP00010022924
annotation not available
   
   0.454
znrd1
Zinc ribbon domain containing 1.
   
 
 0.444
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.