STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115568072Palmitoyltransferase ZDHHC3-like. (327 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1.
    
 0.642
ENSSAUP00010053742
annotation not available
    
 0.617
prep
Prolyl endopeptidase.
   
  
 0.606
coq3
Coenzyme Q3, methyltransferase.
     
 0.563
rad50
RAD50 double strand break repair protein.
    
 0.559
LOC115583553
Golgin subfamily A member 7-like.
    
 0.538
GOLGA7
Golgin subfamily A member 7-like.
    
 0.538
GOLGA7B
Golgin A7 family member B.
    
 0.537
golga7b
Golgin A7 family member B.
    
 0.537
mre11
MRE11 homolog, double strand break repair nuclease.
    
  0.517
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.