STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a18Solute carrier family 22 member 18. (427 aa)    
Predicted Functional Partners:
phlda2
Pleckstrin homology like domain family A member 2.
      
 0.547
LOC115586800
Nucleosome assembly protein 1-like 4.
      
 0.519
ENSSAUP00010004176
Solute carrier family 22 member 31.
      
 0.506
slc22a16
Solute carrier family 22 member 16.
   
  
 0.504
LOC115586729
Oxysterol-binding protein-related protein 5-like.
   
  
 0.498
DLK1
Delta like non-canonical Notch ligand 1.
    
 
 0.459
LOC115584986
Non-structural maintenance of chromosomes element 3 homolog.
      
 0.457
OSBPL8
Oxysterol binding protein like 8.
   
  
 0.419
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.