STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC24A1Sodium/potassium/calcium exchanger 1-like. (782 aa)    
Predicted Functional Partners:
ENSSAUP00010021438
Solute carrier family 24 member 1.
  
 
 
0.799
LOC115586122
Sodium/potassium/calcium exchanger 1-like.
  
 
 
0.796
ENSSAUP00010005542
Guided entry of tail-anchored proteins factor 4.
    
   0.707
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
   0.560
rad23a
RAD23 homolog A, nucleotide excision repair protein.
    
   0.560
LOC115591748
UV excision repair protein RAD23 homolog A-like.
    
   0.560
LOC115594339
Sodium/calcium exchanger 1-like.
   
 
0.469
LOC115565950
Sodium/calcium exchanger 2-like.
   
 
0.469
LOC115574461
Sodium/calcium exchanger 1-like.
   
 
0.469
ENSSAUP00010041191
Solute carrier family 8 member 2a.
   
 
0.469
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.