STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115574269Galectin-9-like. (349 aa)    
Predicted Functional Partners:
LOC115595093
Ubl carboxyl-terminal hydrolase 18-like.
   
  
 0.796
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.719
ENSSAUP00010056173
annotation not available
   
 
 0.648
pbk
PDZ binding kinase.
    
   0.639
ptprc
Protein tyrosine phosphatase receptor type C.
   
 
 0.628
slc38a9
Solute carrier family 38 member 9.
    
 
 0.578
LOC115597270
Galectin-3-like.
    
 
0.535
ENSSAUP00010004043
annotation not available
    
 
0.535
LOC115597648
Galectin-3-like.
    
 
0.535
ENSSAUP00010065678
annotation not available
    
 
0.535
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.