STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC11559413852 kDa repressor of the inhibitor of the protein kinase-like. (718 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.784
mst1r
Macrophage stimulating 1 receptor.
    
  0.784
LOC115583471
Macrophage-stimulating protein receptor-like.
    
  0.784
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.642
wdr90
WD repeat domain 90.
    
 
 0.577
ENSSAUP00010005290
annotation not available
    
  0.531
sned1
Sushi, nidogen and EGF like domains 1.
    
  0.531
ENSSAUP00010005175
annotation not available
    
  0.508
ENSSAUP00010028741
annotation not available
    
  0.490
ENSSAUP00010017616
DnaJ (Hsp40) homolog, subfamily C, member 3a.
    
 0.457
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.