STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115576234Forkhead box protein J1-A-like. (474 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.773
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.681
LOC115597076
Group XIIB secretory phospholipase A2-like protein.
   
    0.666
rfx2
Regulatory factor X2.
    
 
 0.616
sting1
Stimulator of interferon response cGAMP interactor 1.
    
  0.592
rfx3
Regulatory factor X3.
    
 
 0.580
sirt1
Sirtuin 1.
    
 0.560
ENSSAUP00010014716
Transmembrane p24 trafficking protein 7.
    
  0.552
LOC115579867
Transmembrane emp24 domain-containing protein 3-like.
    
  0.552
LOC115572053
TIR domain-containing adapter molecule 1-like.
    
  0.552
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.