STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryzCrystallin zeta. (329 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
    
 0.919
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.898
ei24
EI24 autophagy associated transmembrane protein.
     
 0.850
katnal2
Katanin catalytic subunit A1 like 2.
   
 0.804
ENSSAUP00010025623
Fatty acid synthase.
  
0.776
LOC115569696
Phthiocerol synthesis polyketide synthase type I PpsD-like.
  
 0.776
ENSSAUP00010037281
annotation not available
  
 0.776
ENSSAUP00010005918
Alcohol dehydrogenase iron containing 1.
    
 0.748
dera
Deoxyribose-phosphate aldolase.
    
 0.726
atp5f1d
ATP synthase F1 subunit delta.
   
 0.722
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.