STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb1Ankyrin repeat and SOCS box containing 1. (349 aa)    
Predicted Functional Partners:
CUL5
Cullin-5.
    
 0.912
LOC115567385
Cullin-5-like.
    
 0.912
eloc
Elongin C.
    
 0.855
ENSSAUP00010011056
Ankyrin repeat and SOCS box containing 6.
  
 
 0.829
rnf7
Ring finger protein 7.
    
 0.797
traf3ip1
TRAF3 interacting protein 1.
 
  
 0.748
commd8
COMM domain containing 8.
   
  0.728
asb7
Ankyrin repeat and SOCS box containing 7.
  
 
0.719
commd1
Copper metabolism domain containing 1.
    
  0.718
LOC115589699
NEDD8-like.
    
  0.714
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.