STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl27Mitochondrial ribosomal protein L27. (147 aa)    
Predicted Functional Partners:
mrpl20
Mitochondrial ribosomal protein L20.
  
 
 0.999
LOC115577492
40S ribosomal protein S18.
  
 
 0.999
ENSSAUP00010003923
Mitochondrial ribosomal protein L21.
  
 
 0.999
mrpl22
Mitochondrial ribosomal protein L22.
  
 
 0.999
rps3
Ribosomal protein S3.
  
 
 0.999
mrpl11
Mitochondrial ribosomal protein L11.
  
 
 0.999
rps15
Ribosomal protein S15.
  
 
 0.999
rpl23
Ribosomal protein L23.
  
 
 0.999
ENSSAUP00010019602
Mitochondrial ribosomal protein L36.
   
 
 0.999
ENSSAUP00010028794
Mitochondrial ribosomal protein L13.
  
 
 0.999
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.