STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115595556Hematopoietic lineage cell-specific protein-like. (523 aa)    
Predicted Functional Partners:
was
WASP actin nucleation promoting factor.
   
 0.921
ENSSAUP00010026157
Zgc:101810.
   
 0.918
ENSSAUP00010023678
Tight junction protein 1a.
    
 0.909
ENSSAUP00010029944
Tight junction protein 1b.
    
 0.909
LOC115596694
Actin-related protein 2-B.
   
 0.895
ACTR2
Actin related protein 2.
   
 0.895
ENSSAUP00010035702
Actin related protein 3.
   
 0.894
ENSSAUP00010042616
annotation not available
   
 0.894
gosr1
Golgi SNAP receptor complex member 1.
   
 0.889
stx5
Syntaxin 5.
    
 0.885
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.