STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uap1UDP-N-acetylglucosamine pyrophosphorylase 1. (524 aa)    
Predicted Functional Partners:
galt
Galactose-1-phosphate uridylyltransferase.
    
 0.952
pgm3
Phosphoglucomutase 3.
  
 0.942
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.879
ENSSAUP00010066328
UDP-galactose-4-epimerase.
    
 0.879
LOC115580156
Chitin synthase chs-2-like.
   
 
 0.868
ENSSAUP00010048730
annotation not available
   
 
 0.863
ugdh
UDP-glucose 6-dehydrogenase.
     
 0.854
uxs1
UDP-glucuronate decarboxylase 1.
  
 
 0.849
tgds
TDP-glucose 4,6-dehydratase.
  
 
 0.844
yipf6
Yip1 domain family member 6.
   
 
 0.827
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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