STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115594412Down syndrome cell adhesion molecule homolog. (2036 aa)    
Predicted Functional Partners:
LOC115571737
Netrin-3-like.
   
 0.728
ENSSAUP00010012818
Neogenin 1b.
   
0.683
dcc
DCC netrin 1 receptor.
   
0.683
LOC115576197
Netrin-1-like.
   
 0.682
NTN1
Netrin-1.
   
 0.682
LOC115589112
Netrin-1-like.
   
 0.659
pak1
P21 (RAC1) activated kinase 1.
   
 0.620
PAK3
P21 (RAC1) activated kinase 3.
   
 0.620
LOC115580493
Immunoglobulin superfamily DCC subclass member 4-like.
    
0.592
DSCAML1
DS cell adhesion molecule like 1.
  
  
 
0.553
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.